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Boeing could supply virtual floppy drives that take USB drives or SD cards if they wanted to. I’m sure they don’t want to spend the money getting one certified until they are forced to though.
Floppy disks will continue working fine until the supply of new old stock disks runs out or becomes unreliable.
I just add my CA to my devices and use self signed certificates for stuff on my LAN. I don’t want to go through all the trouble of using lets encrypt for something that’s not accessible from the internet.